Plot the ligand-receptor correlation summary

Usage

gene_corr_cci(
  results = .getResultsFromGlobal(),
  all.genes = FALSE,
  .pair = NULL,
  .exclude.same.types = TRUE
)

Arguments

results: The scMultisim result object
all.genes: Whether to use all genes or only the ligand/receptor genes
.pair: Return the raw data for the given LR pair
.exclude.same.types: Whether to exclude neighbor cells with same cell type

Value

none

Examples

results <- sim_example_200_cells_spatial()
#> CCI simulation is enabled.
#> Get CIF...100..200..Done
#> Get params...Done
#> Simulating...50..100..150..200..
#> Time spent: 2.11 mins
gene_corr_cci(results)
#> [[1]]
#>   target regulator correlation corr.non.nbs corr.non.ct
#> 1    101       103  0.13046674  -0.04319376  0.02076041
#> 2    102       104  0.05855992   0.02218742  0.01952666
#> 
#> [[2]]

#>