Add experimental noise to true counts — add_expr_noise • scMultiSim

Add experimental noise to true counts

Usage

add_expr_noise(results, ...)

Arguments

results: The scMultisim result object
...: randseed: The random seed protocol: UMI or non-UMI gene_len: A vector with lengths of all genes alpha_mean, alpha_sd: rate of subsampling of transcripts during capture step depth_mean, depth_sd: The sequencing depth

Value

none

See also

The underlying methods True2ObservedCounts and True2ObservedATAC

Examples

results <- sim_example_200_cells()
#> Time spent: 0.01 mins
add_expr_noise(results)
#> Adding experimental noise...
#> 50..100..150..200..Using atac_counts
#> Time spent: 0.03 mins